Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBB1Q9H4B7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 AC008550.1-201ENST00000511500 884 ntBASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 AC010240.3-201ENST00000607688 395 ntBASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 AC080080.1-201ENST00000625121 2420 ntBASIC17.52■□□□□ 0.4
TUBB1Q9H4B7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TUBB1Q9H4B7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
TUBB1Q9H4B7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.52■□□□□ 0.39
TUBB1Q9H4B7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.52■□□□□ 0.39
TUBB1Q9H4B7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TUBB1Q9H4B7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TUBB1Q9H4B7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.52■□□□□ 0.39
TUBB1Q9H4B7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TUBB1Q9H4B7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 AC100803.2-201ENST00000562459 1963 ntBASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 MIR1238-201ENST00000408483 83 ntBASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 AC116562.4-202ENST00000641738 218 ntBASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 AC012313.1-201ENST00000593393 3059 ntBASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBB1Q9H4B7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 MIR4785-201ENST00000585005 73 ntBASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBB1Q9H4B7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TUBB1Q9H4B7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBB1Q9H4B7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBB1Q9H4B7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TUBB1Q9H4B7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBB1Q9H4B7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.49■□□□□ 0.39
TUBB1Q9H4B7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBB1Q9H4B7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBB1Q9H4B7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TUBB1Q9H4B7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBB1Q9H4B7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TUBB1Q9H4B7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms