Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCX3BQ9H321 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
VCX3BQ9H321 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
VCX3BQ9H321 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
VCX3BQ9H321 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
VCX3BQ9H321 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
VCX3BQ9H321 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.34■□□□□ 0.37
VCX3BQ9H321 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
VCX3BQ9H321 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VCX3BQ9H321 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.34■□□□□ 0.37
VCX3BQ9H321 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCX3BQ9H321 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.34■□□□□ 0.37
VCX3BQ9H321 AL035685.1-201ENST00000636663 812 ntBASIC17.34■□□□□ 0.37
VCX3BQ9H321 AC013268.1-206ENST00000638368 961 ntBASIC17.34■□□□□ 0.37
VCX3BQ9H321 AC112229.1-201ENST00000639295 961 ntBASIC17.34■□□□□ 0.37
VCX3BQ9H321 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
VCX3BQ9H321 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
VCX3BQ9H321 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
VCX3BQ9H321 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VCX3BQ9H321 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VCX3BQ9H321 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.33■□□□□ 0.37
VCX3BQ9H321 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
VCX3BQ9H321 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VCX3BQ9H321 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VCX3BQ9H321 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VCX3BQ9H321 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.33■□□□□ 0.37
VCX3BQ9H321 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
VCX3BQ9H321 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VCX3BQ9H321 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.33■□□□□ 0.36
VCX3BQ9H321 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
VCX3BQ9H321 AC027612.3-201ENST00000413684 1047 ntBASIC17.33■□□□□ 0.36
VCX3BQ9H321 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VCX3BQ9H321 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCX3BQ9H321 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCX3BQ9H321 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCX3BQ9H321 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.33■□□□□ 0.36
VCX3BQ9H321 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCX3BQ9H321 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCX3BQ9H321 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCX3BQ9H321 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCX3BQ9H321 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
VCX3BQ9H321 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCX3BQ9H321 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCX3BQ9H321 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
VCX3BQ9H321 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
VCX3BQ9H321 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VCX3BQ9H321 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 AL138688.1-201ENST00000624851 1594 ntBASIC17.32■□□□□ 0.36
VCX3BQ9H321 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
VCX3BQ9H321 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VCX3BQ9H321 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VCX3BQ9H321 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VCX3BQ9H321 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 UBALD1-205ENST00000590891 2641 ntBASIC17.32■□□□□ 0.36
VCX3BQ9H321 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
VCX3BQ9H321 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
VCX3BQ9H321 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VCX3BQ9H321 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.32■□□□□ 0.36
VCX3BQ9H321 AF213884.3-201ENST00000563833 479 ntBASIC17.32■□□□□ 0.36
VCX3BQ9H321 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.32■□□□□ 0.36
VCX3BQ9H321 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.32■□□□□ 0.36
VCX3BQ9H321 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
VCX3BQ9H321 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.32■□□□□ 0.36
VCX3BQ9H321 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
VCX3BQ9H321 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
VCX3BQ9H321 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VCX3BQ9H321 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
VCX3BQ9H321 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms