Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 KRT18P6-201ENST00000555540 1265 ntBASIC18.96■□□□□ 0.63
DDX47Q9H0S4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 AC006058.3-201ENST00000606217 1069 ntBASIC18.96■□□□□ 0.63
DDX47Q9H0S4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX47Q9H0S4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 MIR149-201ENST00000384879 89 ntBASIC18.95■□□□□ 0.62
DDX47Q9H0S4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 C1QBPP2-201ENST00000528754 825 ntBASIC18.95■□□□□ 0.62
DDX47Q9H0S4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 FSCN1P1-201ENST00000568912 1481 ntBASIC18.95■□□□□ 0.62
DDX47Q9H0S4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 AC022211.2-201ENST00000585075 2527 ntBASIC18.95■□□□□ 0.62
DDX47Q9H0S4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
DDX47Q9H0S4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 AC096733.2-201ENST00000609937 1394 ntBASIC18.94■□□□□ 0.62
DDX47Q9H0S4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 AC036111.1-201ENST00000533973 1582 ntBASIC18.94■□□□□ 0.62
DDX47Q9H0S4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 AC084018.2-201ENST00000613093 2607 ntBASIC18.94■□□□□ 0.62
DDX47Q9H0S4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.94■□□□□ 0.62
DDX47Q9H0S4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX47Q9H0S4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.93■□□□□ 0.62
DDX47Q9H0S4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.93■□□□□ 0.62
DDX47Q9H0S4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
DDX47Q9H0S4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
DDX47Q9H0S4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms