Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-1Q9BYR8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 KRT16P1-201ENST00000399124 1418 ntBASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 AC009102.3-201ENST00000623118 1491 ntBASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 CYP51A1P1-201ENST00000492267 1507 ntBASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 MCCD1P1-208ENST00000445732 328 ntBASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 AC026271.3-201ENST00000571884 352 ntBASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 AP000692.2-201ENST00000608391 879 ntBASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 CROCCP2-202ENST00000412962 2773 ntBASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP3-1Q9BYR8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 Z97985.1-201ENST00000332270 946 ntBASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 MIR149-201ENST00000384879 89 ntBASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 AL603841.1-201ENST00000430516 664 ntBASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 RNA5SP413-201ENST00000516373 109 ntBASIC9.22□□□□□ -0.93
KRTAP3-1Q9BYR8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms