Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 AL157888.1-201ENST00000631930 593 ntBASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.7■□□□□ 0.26
RSPO3Q9BXY4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 AL138966.2-201ENST00000621997 464 ntBASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.69■□□□□ 0.26
RSPO3Q9BXY4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 PCDHA12-202ENST00000613593 2588 ntBASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 HMGA1P5-201ENST00000412453 271 ntBASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 ECEL1P3-201ENST00000427961 737 ntBASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO3Q9BXY4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 AC128688.1-201ENST00000487626 519 ntBASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.67■□□□□ 0.26
RSPO3Q9BXY4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms