Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCGF1Q9BSM1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 RASA4DP-201ENST00000460726 1199 ntBASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 VENTXP5-201ENST00000523979 775 ntBASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PCGF1Q9BSM1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCGF1Q9BSM1 HEIH-201ENST00000623091 1652 ntBASIC15.27■□□□□ 0.03
PCGF1Q9BSM1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PCGF1Q9BSM1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.27■□□□□ 0.03
PCGF1Q9BSM1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCGF1Q9BSM1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCGF1Q9BSM1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.03
PCGF1Q9BSM1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PCGF1Q9BSM1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCGF1Q9BSM1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PCGF1Q9BSM1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCGF1Q9BSM1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCGF1Q9BSM1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
PCGF1Q9BSM1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCGF1Q9BSM1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.27■□□□□ 0.03
PCGF1Q9BSM1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 MIR564-202ENST00000385049 94 ntBASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 PCED1CP-201ENST00000419887 785 ntBASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 UPK3BP1-201ENST00000428678 509 ntBASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.26■□□□□ 0.03
PCGF1Q9BSM1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 AC034236.2-201ENST00000606662 1610 ntBASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 SEC1P-202ENST00000473944 940 ntBASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 ZNF444P1-201ENST00000559497 298 ntBASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 AP000550.4-202ENST00000639755 178 ntBASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 AC068587.9-201ENST00000641814 219 ntBASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
PCGF1Q9BSM1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms