Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 AC011558.1-201ENST00000623459 338 ntBASIC16.88■□□□□ 0.29
ZNF559Q9BR84 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF559Q9BR84 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF559Q9BR84 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF559Q9BR84 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ZNF559Q9BR84 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF559Q9BR84 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ZNF559Q9BR84 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF559Q9BR84 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ZNF559Q9BR84 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF559Q9BR84 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.88■□□□□ 0.29
ZNF559Q9BR84 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF559Q9BR84 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF559Q9BR84 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.88■□□□□ 0.29
ZNF559Q9BR84 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ZNF559Q9BR84 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 ESPNP-201ENST00000270691 2015 ntBASIC16.87■□□□□ 0.29
ZNF559Q9BR84 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.87■□□□□ 0.29
ZNF559Q9BR84 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ZNF559Q9BR84 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 AL163051.1-201ENST00000569214 1512 ntBASIC16.86■□□□□ 0.29
ZNF559Q9BR84 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 MIR149-201ENST00000384879 89 ntBASIC16.86■□□□□ 0.29
ZNF559Q9BR84 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 KRT18P23-201ENST00000435622 1283 ntBASIC16.86■□□□□ 0.29
ZNF559Q9BR84 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
ZNF559Q9BR84 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.85■□□□□ 0.29
ZNF559Q9BR84 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF559Q9BR84 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF559Q9BR84 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ZNF559Q9BR84 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF559Q9BR84 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF559Q9BR84 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF559Q9BR84 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF559Q9BR84 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF559Q9BR84 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms