Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHOX2BQ99453 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHOX2BQ99453 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHOX2BQ99453 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHOX2BQ99453 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 MCCD1P2-201ENST00000423228 335 ntBASIC18.36■□□□□ 0.53
PHOX2BQ99453 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHOX2BQ99453 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHOX2BQ99453 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PHOX2BQ99453 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 AC093512.1-201ENST00000617969 520 ntBASIC18.36■□□□□ 0.53
PHOX2BQ99453 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PHOX2BQ99453 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHOX2BQ99453 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PHOX2BQ99453 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHOX2BQ99453 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.35■□□□□ 0.53
PHOX2BQ99453 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHOX2BQ99453 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.35■□□□□ 0.53
PHOX2BQ99453 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.35■□□□□ 0.53
PHOX2BQ99453 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PHOX2BQ99453 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHOX2BQ99453 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHOX2BQ99453 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHOX2BQ99453 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.35■□□□□ 0.53
PHOX2BQ99453 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.35■□□□□ 0.53
PHOX2BQ99453 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PHOX2BQ99453 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.35■□□□□ 0.53
PHOX2BQ99453 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.35■□□□□ 0.53
PHOX2BQ99453 AC027612.4-201ENST00000605371 583 ntBASIC18.35■□□□□ 0.53
PHOX2BQ99453 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PHOX2BQ99453 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PHOX2BQ99453 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHOX2BQ99453 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHOX2BQ99453 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.35■□□□□ 0.53
PHOX2BQ99453 AC098818.2-201ENST00000564925 2320 ntBASIC18.35■□□□□ 0.53
PHOX2BQ99453 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.35■□□□□ 0.53
PHOX2BQ99453 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PHOX2BQ99453 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHOX2BQ99453 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHOX2BQ99453 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHOX2BQ99453 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHOX2BQ99453 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 LETM1P2-201ENST00000597330 2178 ntBASIC18.34■□□□□ 0.53
PHOX2BQ99453 AC125437.2-201ENST00000625180 2167 ntBASIC18.34■□□□□ 0.53
PHOX2BQ99453 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHOX2BQ99453 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHOX2BQ99453 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHOX2BQ99453 AC009947.1-201ENST00000444350 727 ntBASIC18.34■□□□□ 0.53
PHOX2BQ99453 AC022494.1-201ENST00000466044 728 ntBASIC18.34■□□□□ 0.53
PHOX2BQ99453 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 AC104390.1-201ENST00000555663 520 ntBASIC18.34■□□□□ 0.53
PHOX2BQ99453 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 AL008721.1-201ENST00000609964 604 ntBASIC18.34■□□□□ 0.53
PHOX2BQ99453 AC008735.5-201ENST00000623544 497 ntBASIC18.34■□□□□ 0.53
PHOX2BQ99453 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHOX2BQ99453 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHOX2BQ99453 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHOX2BQ99453 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHOX2BQ99453 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHOX2BQ99453 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHOX2BQ99453 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PHOX2BQ99453 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHOX2BQ99453 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PHOX2BQ99453 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHOX2BQ99453 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PHOX2BQ99453 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms