Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
DUX3Q96PT4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.16□□□□□ -0.14
DUX3Q96PT4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DUX3Q96PT4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 AC018445.3-201ENST00000624177 1945 ntBASIC14.15□□□□□ -0.14
DUX3Q96PT4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 PRELID1P1-202ENST00000567272 903 ntBASIC14.15□□□□□ -0.14
DUX3Q96PT4 MIR3652-201ENST00000579335 131 ntBASIC14.15□□□□□ -0.14
DUX3Q96PT4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.15□□□□□ -0.14
DUX3Q96PT4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DUX3Q96PT4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
DUX3Q96PT4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
DUX3Q96PT4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 AL450487.1-201ENST00000426799 995 ntBASIC14.14□□□□□ -0.15
DUX3Q96PT4 CHCHD2P8-201ENST00000429873 447 ntBASIC14.14□□□□□ -0.15
DUX3Q96PT4 LINC00265-3P-201ENST00000447588 903 ntBASIC14.14□□□□□ -0.15
DUX3Q96PT4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 MIR3180-1-201ENST00000580374 94 ntBASIC14.14□□□□□ -0.15
DUX3Q96PT4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 MIR3180-3-201ENST00000584616 94 ntBASIC14.14□□□□□ -0.15
DUX3Q96PT4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 AL163051.1-201ENST00000569214 1512 ntBASIC14.14□□□□□ -0.15
DUX3Q96PT4 AC026471.1-201ENST00000564629 3026 ntBASIC14.14□□□□□ -0.15
DUX3Q96PT4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
DUX3Q96PT4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DUX3Q96PT4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.13□□□□□ -0.15
DUX3Q96PT4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.13□□□□□ -0.15
DUX3Q96PT4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.13□□□□□ -0.15
DUX3Q96PT4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DUX3Q96PT4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms