Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NECTIN4Q96NY8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 AC211486.1-202ENST00000416371 468 ntBASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 AC007967.2-201ENST00000432613 625 ntBASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 DNAJB3-202ENST00000449667 1266 ntBASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 AC211476.1-201ENST00000503899 468 ntBASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 MIR1199-201ENST00000621445 119 ntBASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 SDHAP2-201ENST00000455183 2001 ntBASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.77■□□□□ 0.6
NECTIN4Q96NY8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.77■□□□□ 0.59
NECTIN4Q96NY8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NECTIN4Q96NY8 AP002414.3-201ENST00000589352 1468 ntBASIC18.77■□□□□ 0.59
NECTIN4Q96NY8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NECTIN4Q96NY8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 AC009947.1-201ENST00000444350 727 ntBASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 AP006288.1-201ENST00000446065 395 ntBASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 LINC00602-201ENST00000629776 2065 ntBASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NECTIN4Q96NY8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 AP000867.4-201ENST00000641616 219 ntBASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 MYLKP1-201ENST00000509077 1580 ntBASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NECTIN4Q96NY8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.74■□□□□ 0.59
NECTIN4Q96NY8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms