Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CALR3Q96L12 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CALR3Q96L12 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CALR3Q96L12 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CALR3Q96L12 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CALR3Q96L12 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CALR3Q96L12 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.24■□□□□ 0.67
CALR3Q96L12 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.24■□□□□ 0.67
CALR3Q96L12 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.24■□□□□ 0.67
CALR3Q96L12 AC142381.4-202ENST00000563973 229 ntBASIC19.24■□□□□ 0.67
CALR3Q96L12 CR769767.2-201ENST00000622735 460 ntBASIC19.24■□□□□ 0.67
CALR3Q96L12 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.24■□□□□ 0.67
CALR3Q96L12 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CALR3Q96L12 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CALR3Q96L12 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CALR3Q96L12 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CALR3Q96L12 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CALR3Q96L12 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CALR3Q96L12 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CALR3Q96L12 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.23■□□□□ 0.67
CALR3Q96L12 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CALR3Q96L12 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.23■□□□□ 0.67
CALR3Q96L12 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CALR3Q96L12 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CALR3Q96L12 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CALR3Q96L12 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CALR3Q96L12 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CALR3Q96L12 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CALR3Q96L12 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.23■□□□□ 0.67
CALR3Q96L12 AP003041.3-201ENST00000527151 707 ntBASIC19.23■□□□□ 0.67
CALR3Q96L12 BX088651.1-201ENST00000540551 451 ntBASIC19.23■□□□□ 0.67
CALR3Q96L12 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.23■□□□□ 0.67
CALR3Q96L12 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.23■□□□□ 0.67
CALR3Q96L12 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CALR3Q96L12 AC112497.1-201ENST00000624824 639 ntBASIC19.23■□□□□ 0.67
CALR3Q96L12 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.23■□□□□ 0.67
CALR3Q96L12 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CALR3Q96L12 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CALR3Q96L12 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CALR3Q96L12 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CALR3Q96L12 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CALR3Q96L12 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CALR3Q96L12 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CALR3Q96L12 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CALR3Q96L12 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CALR3Q96L12 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.22■□□□□ 0.67
CALR3Q96L12 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.22■□□□□ 0.67
CALR3Q96L12 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.22■□□□□ 0.67
CALR3Q96L12 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CALR3Q96L12 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CALR3Q96L12 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.22■□□□□ 0.67
CALR3Q96L12 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.22■□□□□ 0.67
CALR3Q96L12 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.22■□□□□ 0.67
CALR3Q96L12 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.22■□□□□ 0.67
CALR3Q96L12 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.22■□□□□ 0.67
CALR3Q96L12 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.22■□□□□ 0.67
CALR3Q96L12 AC026471.5-201ENST00000615068 467 ntBASIC19.22■□□□□ 0.67
CALR3Q96L12 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CALR3Q96L12 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.22■□□□□ 0.67
CALR3Q96L12 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.22■□□□□ 0.67
CALR3Q96L12 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CALR3Q96L12 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALR3Q96L12 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
CALR3Q96L12 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALR3Q96L12 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALR3Q96L12 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CALR3Q96L12 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CALR3Q96L12 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALR3Q96L12 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALR3Q96L12 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALR3Q96L12 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALR3Q96L12 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.21■□□□□ 0.67
CALR3Q96L12 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CALR3Q96L12 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CALR3Q96L12 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.21■□□□□ 0.67
CALR3Q96L12 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.21■□□□□ 0.67
CALR3Q96L12 AC092338.2-201ENST00000568827 1415 ntBASIC19.21■□□□□ 0.67
CALR3Q96L12 AC012313.1-201ENST00000593393 3059 ntBASIC19.21■□□□□ 0.67
CALR3Q96L12 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms