Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMARCD1Q96GM5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
SMARCD1Q96GM5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.08■□□□□ 0.65
SMARCD1Q96GM5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SMARCD1Q96GM5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SMARCD1Q96GM5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 AC012615.1-201ENST00000565797 1299 ntBASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMARCD1Q96GM5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 AC135776.1-201ENST00000319817 2481 ntBASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 AL845331.1-201ENST00000424978 1190 ntBASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 AC068472.1-201ENST00000474589 881 ntBASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 CLEC4GP1-201ENST00000596555 870 ntBASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 AL353801.3-201ENST00000609898 542 ntBASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMARCD1Q96GM5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 AL096828.2-201ENST00000567259 1965 ntBASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCD1Q96GM5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 AC009113.1-201ENST00000570267 2443 ntBASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.05■□□□□ 0.64
SMARCD1Q96GM5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms