Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.31■□□□□ 0.36
LRRC58Q96CX6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 AC036111.1-201ENST00000533973 1582 ntBASIC17.3■□□□□ 0.36
LRRC58Q96CX6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 AC084018.2-201ENST00000613093 2607 ntBASIC17.3■□□□□ 0.36
LRRC58Q96CX6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC58Q96CX6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 ESRRAP1-201ENST00000400596 1257 ntBASIC17.29■□□□□ 0.36
LRRC58Q96CX6 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 AF186192.3-201ENST00000583427 947 ntBASIC17.29■□□□□ 0.36
LRRC58Q96CX6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 AC073195.1-201ENST00000607241 877 ntBASIC17.29■□□□□ 0.36
LRRC58Q96CX6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 FSCN1P1-201ENST00000568912 1481 ntBASIC17.29■□□□□ 0.36
LRRC58Q96CX6 AP001094.4-201ENST00000579008 2176 ntBASIC17.29■□□□□ 0.36
LRRC58Q96CX6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC58Q96CX6 AC022211.2-201ENST00000585075 2527 ntBASIC17.28■□□□□ 0.36
LRRC58Q96CX6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LRRC58Q96CX6 MESTP1-201ENST00000404287 994 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms