Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 BCL2-203ENST00000589955 5011 ntBASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 CRYGFP-201ENST00000418459 633 ntBASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 WWOX-216ENST00000569818 525 ntBASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC44A1Q8WWI5 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 PRORSD1P-201ENST00000295112 541 ntBASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 AL023803.3-201ENST00000615559 522 ntBASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 REXO1L10P-201ENST00000615707 1290 ntBASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 REXO1L12P-201ENST00000622156 912 ntBASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC44A1Q8WWI5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SLC44A1Q8WWI5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
SLC44A1Q8WWI5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 AL023806.1-201ENST00000603994 1649 ntBASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 AL355312.1-201ENST00000407115 2176 ntBASIC18.2■□□□□ 0.5
SLC44A1Q8WWI5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms