Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHD6Q8TD26 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD6Q8TD26 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD6Q8TD26 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHD6Q8TD26 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHD6Q8TD26 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.26■□□□□ 0.19
CHD6Q8TD26 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD6Q8TD26 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD6Q8TD26 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHD6Q8TD26 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 ZNF815P-204ENST00000434898 1737 ntBASIC16.25■□□□□ 0.19
CHD6Q8TD26 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 AP005212.1-201ENST00000581547 1997 ntBASIC16.25■□□□□ 0.19
CHD6Q8TD26 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD6Q8TD26 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD6Q8TD26 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD6Q8TD26 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD6Q8TD26 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD6Q8TD26 GPS2P2-201ENST00000430745 888 ntBASIC16.25■□□□□ 0.19
CHD6Q8TD26 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHD6Q8TD26 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 AC133561.1-201ENST00000568600 2415 ntBASIC16.25■□□□□ 0.19
CHD6Q8TD26 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHD6Q8TD26 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHD6Q8TD26 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHD6Q8TD26 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.25■□□□□ 0.19
CHD6Q8TD26 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CHD6Q8TD26 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.24■□□□□ 0.19
CHD6Q8TD26 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.24■□□□□ 0.19
CHD6Q8TD26 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.24■□□□□ 0.19
CHD6Q8TD26 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.24■□□□□ 0.19
CHD6Q8TD26 TREML5P-201ENST00000421694 576 ntBASIC16.24■□□□□ 0.19
CHD6Q8TD26 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.24■□□□□ 0.19
CHD6Q8TD26 ACTBP11-201ENST00000436287 1126 ntBASIC16.24■□□□□ 0.19
CHD6Q8TD26 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.24■□□□□ 0.19
CHD6Q8TD26 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.24■□□□□ 0.19
CHD6Q8TD26 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 AC020907.1-201ENST00000616460 1350 ntBASIC16.24■□□□□ 0.19
CHD6Q8TD26 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.24■□□□□ 0.19
CHD6Q8TD26 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.24■□□□□ 0.19
CHD6Q8TD26 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CHD6Q8TD26 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.24■□□□□ 0.19
CHD6Q8TD26 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CHD6Q8TD26 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CHD6Q8TD26 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.24■□□□□ 0.19
CHD6Q8TD26 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHD6Q8TD26 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHD6Q8TD26 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CHD6Q8TD26 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.23■□□□□ 0.19
CHD6Q8TD26 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHD6Q8TD26 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHD6Q8TD26 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.23■□□□□ 0.19
CHD6Q8TD26 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHD6Q8TD26 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.23■□□□□ 0.19
CHD6Q8TD26 AC005237.2-201ENST00000434368 219 ntBASIC16.23■□□□□ 0.19
CHD6Q8TD26 AL592309.1-201ENST00000443127 649 ntBASIC16.23■□□□□ 0.19
CHD6Q8TD26 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHD6Q8TD26 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CHD6Q8TD26 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.23■□□□□ 0.19
CHD6Q8TD26 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHD6Q8TD26 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.23■□□□□ 0.19
CHD6Q8TD26 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHD6Q8TD26 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.23■□□□□ 0.19
CHD6Q8TD26 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.23■□□□□ 0.19
CHD6Q8TD26 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHD6Q8TD26 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.23■□□□□ 0.19
CHD6Q8TD26 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.23■□□□□ 0.19
CHD6Q8TD26 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.23■□□□□ 0.19
CHD6Q8TD26 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms