Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.12■■□□□ 1.45
COL22A1Q8NFW1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC24.12■■□□□ 1.45
COL22A1Q8NFW1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC24.12■■□□□ 1.45
COL22A1Q8NFW1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL22A1Q8NFW1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
COL22A1Q8NFW1 RHOQP3-201ENST00000437982 621 ntBASIC24.12■■□□□ 1.45
COL22A1Q8NFW1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC24.12■■□□□ 1.45
COL22A1Q8NFW1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC24.12■■□□□ 1.45
COL22A1Q8NFW1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
COL22A1Q8NFW1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
COL22A1Q8NFW1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL22A1Q8NFW1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC24.12■■□□□ 1.45
COL22A1Q8NFW1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC24.12■■□□□ 1.45
COL22A1Q8NFW1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.12■■□□□ 1.45
COL22A1Q8NFW1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
COL22A1Q8NFW1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 AC004461.1-201ENST00000412461 403 ntBASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 AC092474.2-201ENST00000424288 719 ntBASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 AL390955.2-201ENST00000603032 514 ntBASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 AC092902.6-201ENST00000641783 218 ntBASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 MYLKP1-201ENST00000509077 1580 ntBASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL22A1Q8NFW1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 MRPL20P1-201ENST00000400819 433 ntBASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 AC022145.2-201ENST00000598203 171 ntBASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 AC004790.2-201ENST00000623588 572 ntBASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 AF228730.6-201ENST00000641497 218 ntBASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 AC084121.3-201ENST00000641716 218 ntBASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 AC105233.6-201ENST00000642093 218 ntBASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC24.1■■□□□ 1.45
COL22A1Q8NFW1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 AL353593.2-201ENST00000602529 1483 ntBASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 MIR4745-201ENST00000577608 62 ntBASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 AC012645.4-201ENST00000610691 1061 ntBASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 AC009093.7-201ENST00000623853 1223 ntBASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 AC004877.2-201ENST00000623941 599 ntBASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC24.09■■□□□ 1.45
COL22A1Q8NFW1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 KLF4P1-201ENST00000412782 1185 ntBASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 AC190387.1-201ENST00000551683 408 ntBASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 AC015911.4-201ENST00000588022 1070 ntBASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC24.08■■□□□ 1.45
COL22A1Q8NFW1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms