Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 AC116407.4-201ENST00000623319 1061 ntBASIC18.63■□□□□ 0.57
RTL3Q8N8U3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 Z83836.1-201ENST00000624605 1642 ntBASIC18.63■□□□□ 0.57
RTL3Q8N8U3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTL3Q8N8U3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 PCED1CP-201ENST00000419887 785 ntBASIC18.62■□□□□ 0.57
RTL3Q8N8U3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 AC011498.5-201ENST00000592027 486 ntBASIC18.62■□□□□ 0.57
RTL3Q8N8U3 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.62■□□□□ 0.57
RTL3Q8N8U3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 AL353692.3-201ENST00000407031 1396 ntBASIC18.62■□□□□ 0.57
RTL3Q8N8U3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTL3Q8N8U3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.61■□□□□ 0.57
RTL3Q8N8U3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL3Q8N8U3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RTL3Q8N8U3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL3Q8N8U3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL3Q8N8U3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL3Q8N8U3 AL390961.4-201ENST00000623958 2535 ntBASIC18.6■□□□□ 0.57
RTL3Q8N8U3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTL3Q8N8U3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.6■□□□□ 0.57
RTL3Q8N8U3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.6■□□□□ 0.57
RTL3Q8N8U3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL3Q8N8U3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.6■□□□□ 0.57
RTL3Q8N8U3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms