Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.57■□□□□ 0.4
KRT78Q8N1N4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 PVRIG2P-201ENST00000435460 978 ntBASIC17.57■□□□□ 0.4
KRT78Q8N1N4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 AC139887.4-201ENST00000607877 719 ntBASIC17.57■□□□□ 0.4
KRT78Q8N1N4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT78Q8N1N4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.56■□□□□ 0.4
KRT78Q8N1N4 KRT18P57-201ENST00000443599 1254 ntBASIC17.56■□□□□ 0.4
KRT78Q8N1N4 YBX1P2-201ENST00000489612 999 ntBASIC17.56■□□□□ 0.4
KRT78Q8N1N4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 AL441883.1-201ENST00000566170 1045 ntBASIC17.56■□□□□ 0.4
KRT78Q8N1N4 AC011558.1-201ENST00000623459 338 ntBASIC17.56■□□□□ 0.4
KRT78Q8N1N4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT78Q8N1N4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.55■□□□□ 0.4
KRT78Q8N1N4 RASA4DP-201ENST00000460726 1199 ntBASIC17.55■□□□□ 0.4
KRT78Q8N1N4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 PHGDH-209ENST00000641074 1780 ntBASIC17.55■□□□□ 0.4
KRT78Q8N1N4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT78Q8N1N4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms