Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 AP005117.1-201ENST00000584346 1413 ntBASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 AC021087.4-201ENST00000563761 564 ntBASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 TERC-201ENST00000602385 541 ntBASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 ZNF259P1-201ENST00000407656 1365 ntBASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 LINC01126-201ENST00000623515 1646 ntBASIC18.78■□□□□ 0.6
NPAS3Q8IXF0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 MIR940-201ENST00000401276 94 ntBASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 SART3-203ENST00000546611 1184 ntBASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS3Q8IXF0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.59
NPAS3Q8IXF0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NPAS3Q8IXF0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.77■□□□□ 0.59
NPAS3Q8IXF0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NPAS3Q8IXF0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NPAS3Q8IXF0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NPAS3Q8IXF0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
NPAS3Q8IXF0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 RPS2P28-201ENST00000314255 741 ntBASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 MIR1233-2-201ENST00000408138 82 ntBASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 MIR1233-1-201ENST00000408722 82 ntBASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 KRT18P65-201ENST00000439811 1286 ntBASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 ABCD1P5-201ENST00000445663 754 ntBASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS3Q8IXF0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NPAS3Q8IXF0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms