Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
CDKL3Q8IVW4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
CDKL3Q8IVW4 AC067852.2-201ENST00000590513 2313 ntBASIC18.71■□□□□ 0.58
CDKL3Q8IVW4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CDKL3Q8IVW4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CDKL3Q8IVW4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 ECEL1P3-201ENST00000427961 737 ntBASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 AP000997.3-201ENST00000623333 2250 ntBASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL3Q8IVW4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 MIR3917-201ENST00000580971 93 ntBASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 KRT18P22-201ENST00000402024 1347 ntBASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL3Q8IVW4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms