Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 AC027601.4-201ENST00000611259 610 ntBASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.43■□□□□ 0.7
NPAS4Q8IUM7 AC116562.4-201ENST00000641316 2276 ntBASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 FAM220CP-201ENST00000395253 831 ntBASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 AC098831.1-202ENST00000438821 336 ntBASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 AC092910.1-201ENST00000482027 1129 ntBASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS4Q8IUM7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 PGAM5P1-201ENST00000518923 814 ntBASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 AC012640.2-201ENST00000561606 901 ntBASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 FAM197Y3-203ENST00000618346 717 ntBASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 AC008735.5-201ENST00000623544 497 ntBASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.41■□□□□ 0.7
NPAS4Q8IUM7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 NKAPP1-205ENST00000585790 367 ntBASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 AP000867.4-201ENST00000641616 219 ntBASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS4Q8IUM7 ANO7L1-203ENST00000602586 1720 ntBASIC19.39■□□□□ 0.7
NPAS4Q8IUM7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NPAS4Q8IUM7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 MED15P5-201ENST00000423150 992 ntBASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 AL591424.1-201ENST00000442569 1213 ntBASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms