Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 FLJ13224-201ENST00000313737 1514 ntBASIC18.94■□□□□ 0.62
RFX6Q8HWS3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 LINC01568-207ENST00000641790 1380 ntBASIC18.93■□□□□ 0.62
RFX6Q8HWS3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.93■□□□□ 0.62
RFX6Q8HWS3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 MIR3180-4-201ENST00000582223 153 ntBASIC18.93■□□□□ 0.62
RFX6Q8HWS3 AC066615.1-201ENST00000640911 628 ntBASIC18.93■□□□□ 0.62
RFX6Q8HWS3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 LETM1P2-201ENST00000597330 2178 ntBASIC18.93■□□□□ 0.62
RFX6Q8HWS3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX6Q8HWS3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 SEC1P-202ENST00000473944 940 ntBASIC18.92■□□□□ 0.62
RFX6Q8HWS3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 AL512604.3-201ENST00000569583 964 ntBASIC18.92■□□□□ 0.62
RFX6Q8HWS3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.92■□□□□ 0.62
RFX6Q8HWS3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.91■□□□□ 0.62
RFX6Q8HWS3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms