Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 AC073621.1-201ENST00000392730 636 ntBASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 AL031432.2-201ENST00000566714 459 ntBASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 AL928711.1-201ENST00000570165 459 ntBASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 Z83851.2-201ENST00000609564 659 ntBASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 AL078644.1-201ENST00000609881 752 ntBASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 ANKRD20A8P-203ENST00000641373 517 ntBASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.62
VPS13BQ7Z7G8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 AC112777.1-201ENST00000540175 1423 ntBASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 AC007967.2-201ENST00000432613 625 ntBASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 AC040169.1-201ENST00000565382 521 ntBASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 AC092865.6-201ENST00000642101 219 ntBASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
VPS13BQ7Z7G8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms