Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 AC024563.2-201ENST00000603282 481 ntBASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 AL390961.4-201ENST00000623958 2535 ntBASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD3Q7Z3D4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LYSMD3Q7Z3D4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LYSMD3Q7Z3D4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.27■□□□□ 0.51
LYSMD3Q7Z3D4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LYSMD3Q7Z3D4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 PHGDH-209ENST00000641074 1780 ntBASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LYSMD3Q7Z3D4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 BICD1-207ENST00000551848 1962 ntBASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 MIR662-201ENST00000384847 95 ntBASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 AL121956.5-201ENST00000625261 221 ntBASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 AL162741.1-201ENST00000565563 1558 ntBASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD3Q7Z3D4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms