Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 AL121956.5-201ENST00000625261 221 ntBASIC12.04□□□□□ -0.48
SCXQ7RTU7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.04□□□□□ -0.48
SCXQ7RTU7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SCXQ7RTU7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 PCED1CP-201ENST00000419887 785 ntBASIC12.03□□□□□ -0.48
SCXQ7RTU7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.03□□□□□ -0.48
SCXQ7RTU7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 AC009113.1-201ENST00000570267 2443 ntBASIC12.03□□□□□ -0.48
SCXQ7RTU7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SCXQ7RTU7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCXQ7RTU7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms