Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 SERPINH1P1-201ENST00000419794 1249 ntBASIC11.54□□□□□ -0.56
LINC00575Q6W349 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 RGMA-211ENST00000557420 989 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 AL121832.2-201ENST00000610979 668 ntBASIC11.54□□□□□ -0.56
LINC00575Q6W349 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 KRT8P41-201ENST00000533985 1514 ntBASIC11.54□□□□□ -0.56
LINC00575Q6W349 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00575Q6W349 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00575Q6W349 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 CFL2-205ENST00000555765 632 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 AC011767.1-201ENST00000617410 1153 ntBASIC11.53□□□□□ -0.56
LINC00575Q6W349 AL121829.2-201ENST00000620908 328 ntBASIC11.53□□□□□ -0.56
LINC00575Q6W349 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 HLA-A-209ENST00000638375 975 ntBASIC11.53□□□□□ -0.56
LINC00575Q6W349 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00575Q6W349 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00575Q6W349 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms