Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 AL157888.1-201ENST00000631930 593 ntBASIC20.52■□□□□ 0.88
SHC4Q6S5L8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SHC4Q6S5L8 AC100803.2-201ENST00000562459 1963 ntBASIC20.52■□□□□ 0.87
SHC4Q6S5L8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.52■□□□□ 0.87
SHC4Q6S5L8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
SHC4Q6S5L8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SHC4Q6S5L8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 DUTP2-201ENST00000519164 463 ntBASIC20.51■□□□□ 0.87
SHC4Q6S5L8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC4Q6S5L8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 AL512604.3-201ENST00000569583 964 ntBASIC20.5■□□□□ 0.87
SHC4Q6S5L8 AL138966.2-201ENST00000621997 464 ntBASIC20.5■□□□□ 0.87
SHC4Q6S5L8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 AC066615.1-201ENST00000640911 628 ntBASIC20.5■□□□□ 0.87
SHC4Q6S5L8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 LINC00167-201ENST00000530583 1419 ntBASIC20.5■□□□□ 0.87
SHC4Q6S5L8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC4Q6S5L8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 PP12613-201ENST00000424958 2230 ntBASIC20.49■□□□□ 0.87
SHC4Q6S5L8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHC4Q6S5L8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHC4Q6S5L8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SHC4Q6S5L8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SHC4Q6S5L8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHC4Q6S5L8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHC4Q6S5L8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
SHC4Q6S5L8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SHC4Q6S5L8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHC4Q6S5L8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHC4Q6S5L8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHC4Q6S5L8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SHC4Q6S5L8 AC087499.1-201ENST00000418141 1075 ntBASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms