Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 MIR149-201ENST00000384879 89 ntBASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 AC126763.1-201ENST00000552015 2118 ntBASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 AC009102.3-201ENST00000623118 1491 ntBASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 SDHAP2-201ENST00000455183 2001 ntBASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 BICD1-207ENST00000551848 1962 ntBASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 AC069148.1-201ENST00000608741 768 ntBASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFWD3Q6PCD5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.93■□□□□ 0.62
RFWD3Q6PCD5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RFWD3Q6PCD5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms