Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 AC145285.6-201ENST00000604632 637 ntBASIC18.89■□□□□ 0.61
LRRC38Q5VT99 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.89■□□□□ 0.61
LRRC38Q5VT99 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 AL138966.2-201ENST00000621997 464 ntBASIC18.89■□□□□ 0.61
LRRC38Q5VT99 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC38Q5VT99 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 AC141257.4-201ENST00000634557 245 ntBASIC18.88■□□□□ 0.61
LRRC38Q5VT99 AC136944.6-201ENST00000634818 245 ntBASIC18.88■□□□□ 0.61
LRRC38Q5VT99 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 LINC00167-201ENST00000530583 1419 ntBASIC18.88■□□□□ 0.61
LRRC38Q5VT99 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LRRC38Q5VT99 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 AC113404.2-201ENST00000507884 177 ntBASIC18.87■□□□□ 0.61
LRRC38Q5VT99 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 AC093827.2-201ENST00000512654 315 ntBASIC18.87■□□□□ 0.61
LRRC38Q5VT99 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 AL157888.1-201ENST00000631930 593 ntBASIC18.87■□□□□ 0.61
LRRC38Q5VT99 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC38Q5VT99 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 AC012317.2-201ENST00000623305 2251 ntBASIC18.86■□□□□ 0.61
LRRC38Q5VT99 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC38Q5VT99 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms