Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.84■□□□□ 0.93
USH1GQ495M9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
USH1GQ495M9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
USH1GQ495M9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USH1GQ495M9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USH1GQ495M9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USH1GQ495M9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.83■□□□□ 0.93
USH1GQ495M9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USH1GQ495M9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.83■□□□□ 0.93
USH1GQ495M9 MINOS1P3-201ENST00000457048 203 ntBASIC20.83■□□□□ 0.93
USH1GQ495M9 KRT18P31-201ENST00000506277 1292 ntBASIC20.83■□□□□ 0.93
USH1GQ495M9 AC091304.2-201ENST00000564639 760 ntBASIC20.83■□□□□ 0.93
USH1GQ495M9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.83■□□□□ 0.93
USH1GQ495M9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.83■□□□□ 0.93
USH1GQ495M9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.83■□□□□ 0.93
USH1GQ495M9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.83■□□□□ 0.92
USH1GQ495M9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
USH1GQ495M9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.83■□□□□ 0.92
USH1GQ495M9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USH1GQ495M9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USH1GQ495M9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
USH1GQ495M9 AC004408.2-201ENST00000623613 2777 ntBASIC20.83■□□□□ 0.92
USH1GQ495M9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USH1GQ495M9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USH1GQ495M9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USH1GQ495M9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.83■□□□□ 0.92
USH1GQ495M9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.83■□□□□ 0.92
USH1GQ495M9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.83■□□□□ 0.92
USH1GQ495M9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.82■□□□□ 0.92
USH1GQ495M9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USH1GQ495M9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USH1GQ495M9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USH1GQ495M9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USH1GQ495M9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USH1GQ495M9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
USH1GQ495M9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
USH1GQ495M9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
USH1GQ495M9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.82■□□□□ 0.92
USH1GQ495M9 NUS1P2-201ENST00000417358 873 ntBASIC20.82■□□□□ 0.92
USH1GQ495M9 AC246785.2-201ENST00000432512 513 ntBASIC20.82■□□□□ 0.92
USH1GQ495M9 AC068472.1-201ENST00000474589 881 ntBASIC20.82■□□□□ 0.92
USH1GQ495M9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.82■□□□□ 0.92
USH1GQ495M9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.82■□□□□ 0.92
USH1GQ495M9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.82■□□□□ 0.92
USH1GQ495M9 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.82■□□□□ 0.92
USH1GQ495M9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
USH1GQ495M9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.82■□□□□ 0.92
USH1GQ495M9 AC073592.3-201ENST00000625118 1834 ntBASIC20.82■□□□□ 0.92
USH1GQ495M9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
USH1GQ495M9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USH1GQ495M9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
USH1GQ495M9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.82■□□□□ 0.92
USH1GQ495M9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USH1GQ495M9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
USH1GQ495M9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
USH1GQ495M9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USH1GQ495M9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.81■□□□□ 0.92
USH1GQ495M9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
USH1GQ495M9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
USH1GQ495M9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
USH1GQ495M9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USH1GQ495M9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
USH1GQ495M9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USH1GQ495M9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USH1GQ495M9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USH1GQ495M9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USH1GQ495M9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USH1GQ495M9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.81■□□□□ 0.92
USH1GQ495M9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USH1GQ495M9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
USH1GQ495M9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USH1GQ495M9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USH1GQ495M9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USH1GQ495M9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USH1GQ495M9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
USH1GQ495M9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
USH1GQ495M9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USH1GQ495M9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.8■□□□□ 0.92
USH1GQ495M9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USH1GQ495M9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
USH1GQ495M9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.8■□□□□ 0.92
USH1GQ495M9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USH1GQ495M9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USH1GQ495M9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USH1GQ495M9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.8■□□□□ 0.92
USH1GQ495M9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.8■□□□□ 0.92
USH1GQ495M9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.8■□□□□ 0.92
USH1GQ495M9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.8■□□□□ 0.92
USH1GQ495M9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USH1GQ495M9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USH1GQ495M9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.8■□□□□ 0.92
USH1GQ495M9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USH1GQ495M9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.8■□□□□ 0.92
USH1GQ495M9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.8■□□□□ 0.92
USH1GQ495M9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.8■□□□□ 0.92
USH1GQ495M9 AC009154.2-201ENST00000621177 724 ntBASIC20.8■□□□□ 0.92
USH1GQ495M9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USH1GQ495M9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.8■□□□□ 0.92
USH1GQ495M9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USH1GQ495M9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms