Protein–RNA interactions for Protein: Q3BBV1

NBPF20, Neuroblastoma breakpoint family member 20, humanhuman

Predictions only

Length 942 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF20Q3BBV1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF20Q3BBV1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF20Q3BBV1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF20Q3BBV1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NBPF20Q3BBV1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF20Q3BBV1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF20Q3BBV1 SDHAP2-201ENST00000455183 2001 ntBASIC20.2■□□□□ 0.83
NBPF20Q3BBV1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 AC243591.1-201ENST00000452967 1364 ntBASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF20Q3BBV1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 RNPS1P1-201ENST00000507437 918 ntBASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 AL355877.3-201ENST00000622820 899 ntBASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 AL024508.2-201ENST00000607749 1894 ntBASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 NOC2LP1-202ENST00000452600 2235 ntBASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 AC112777.1-201ENST00000540175 1423 ntBASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NBPF20Q3BBV1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 AC018712.1-201ENST00000455767 687 ntBASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 AC093909.1-201ENST00000504731 1122 ntBASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 AL049840.3-201ENST00000602669 611 ntBASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NBPF20Q3BBV1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NBPF20Q3BBV1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
NBPF20Q3BBV1 MYLKP1-201ENST00000509077 1580 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms