Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 AC055717.3-201ENST00000622967 595 ntBASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 AC116407.3-201ENST00000623905 1129 ntBASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.42■□□□□ 0.7
CTC1Q2NKJ3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 HNRNPDP1-201ENST00000439535 754 ntBASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 SCARNA2-201ENST00000458748 420 ntBASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 AL691403.2-201ENST00000618460 490 ntBASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 KRT8P32-201ENST00000512863 1461 ntBASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CTC1Q2NKJ3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 FGFR3P6-201ENST00000457012 610 ntBASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 AC145285.3-201ENST00000564603 959 ntBASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTC1Q2NKJ3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms