Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 DET1-205ENST00000558413 583 ntTSL 4 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 AR-207ENST00000612010 3896 ntTSL 5 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.05□□□□□ -0.48
SYCNQ0VAF6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 NOC2LP1-202ENST00000452600 2235 ntBASIC12.04□□□□□ -0.48
SYCNQ0VAF6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.04□□□□□ -0.48
SYCNQ0VAF6 AC093677.2-201ENST00000600169 1863 ntBASIC12.04□□□□□ -0.48
SYCNQ0VAF6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYCNQ0VAF6 FER1L4-210ENST00000615531 5998 ntBASIC12.04□□□□□ -0.48
SYCNQ0VAF6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC12.03□□□□□ -0.48
SYCNQ0VAF6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms