Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 PRORSD1P-201ENST00000295112 541 ntBASIC13.95□□□□□ -0.18
HIST1H1AQ02539 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 SLC25A1P4-201ENST00000567977 778 ntBASIC13.95□□□□□ -0.18
HIST1H1AQ02539 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 AC084018.2-201ENST00000613093 2607 ntBASIC13.95□□□□□ -0.18
HIST1H1AQ02539 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 AC112777.1-201ENST00000540175 1423 ntBASIC13.95□□□□□ -0.18
HIST1H1AQ02539 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HIST1H1AQ02539 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 AP000692.2-201ENST00000608391 879 ntBASIC13.94□□□□□ -0.18
HIST1H1AQ02539 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
HIST1H1AQ02539 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
HIST1H1AQ02539 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms