Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.04■□□□□ 0.16
NKX6-1P78426 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.04■□□□□ 0.16
NKX6-1P78426 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.04■□□□□ 0.16
NKX6-1P78426 SEC1P-202ENST00000473944 940 ntBASIC16.04■□□□□ 0.16
NKX6-1P78426 AC092597.1-201ENST00000487352 616 ntBASIC16.04■□□□□ 0.16
NKX6-1P78426 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-1P78426 UNC93B7-201ENST00000509439 705 ntBASIC16.04■□□□□ 0.16
NKX6-1P78426 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.04■□□□□ 0.16
NKX6-1P78426 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NKX6-1P78426 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.04■□□□□ 0.16
NKX6-1P78426 AC024243.1-201ENST00000609234 778 ntBASIC16.04■□□□□ 0.16
NKX6-1P78426 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-1P78426 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.04■□□□□ 0.16
NKX6-1P78426 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.04■□□□□ 0.16
NKX6-1P78426 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-1P78426 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-1P78426 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-1P78426 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-1P78426 AC034236.2-201ENST00000606662 1610 ntBASIC16.04■□□□□ 0.16
NKX6-1P78426 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-1P78426 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-1P78426 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.03■□□□□ 0.16
NKX6-1P78426 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-1P78426 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-1P78426 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-1P78426 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.03■□□□□ 0.16
NKX6-1P78426 AC016734.2-201ENST00000624325 1377 ntBASIC16.03■□□□□ 0.16
NKX6-1P78426 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-1P78426 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
NKX6-1P78426 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-1P78426 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-1P78426 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.03■□□□□ 0.16
NKX6-1P78426 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-1P78426 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-1P78426 KRT18P23-201ENST00000435622 1283 ntBASIC16.03■□□□□ 0.16
NKX6-1P78426 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.03■□□□□ 0.16
NKX6-1P78426 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.03■□□□□ 0.16
NKX6-1P78426 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.03■□□□□ 0.16
NKX6-1P78426 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.03■□□□□ 0.16
NKX6-1P78426 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.03■□□□□ 0.16
NKX6-1P78426 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-1P78426 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-1P78426 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-1P78426 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.03■□□□□ 0.16
NKX6-1P78426 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NKX6-1P78426 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-1P78426 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-1P78426 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.03■□□□□ 0.16
NKX6-1P78426 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-1P78426 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
NKX6-1P78426 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-1P78426 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NKX6-1P78426 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
NKX6-1P78426 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NKX6-1P78426 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NKX6-1P78426 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NKX6-1P78426 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NKX6-1P78426 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NKX6-1P78426 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NKX6-1P78426 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NKX6-1P78426 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NKX6-1P78426 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.02■□□□□ 0.16
NKX6-1P78426 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NKX6-1P78426 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.02■□□□□ 0.16
NKX6-1P78426 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NKX6-1P78426 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.02■□□□□ 0.16
NKX6-1P78426 AL357033.4-201ENST00000617703 1807 ntBASIC16.02■□□□□ 0.16
NKX6-1P78426 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.02■□□□□ 0.15
NKX6-1P78426 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.02■□□□□ 0.15
NKX6-1P78426 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NKX6-1P78426 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NKX6-1P78426 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NKX6-1P78426 Z98044.1-201ENST00000632503 1764 ntBASIC16.02■□□□□ 0.15
NKX6-1P78426 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
NKX6-1P78426 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NKX6-1P78426 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NKX6-1P78426 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NKX6-1P78426 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NKX6-1P78426 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NKX6-1P78426 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NKX6-1P78426 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.02■□□□□ 0.15
NKX6-1P78426 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.02■□□□□ 0.15
NKX6-1P78426 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NKX6-1P78426 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NKX6-1P78426 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NKX6-1P78426 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NKX6-1P78426 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NKX6-1P78426 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NKX6-1P78426 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NKX6-1P78426 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.01■□□□□ 0.15
NKX6-1P78426 AC006333.2-201ENST00000607957 2099 ntBASIC16.01■□□□□ 0.15
NKX6-1P78426 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NKX6-1P78426 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NKX6-1P78426 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NKX6-1P78426 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NKX6-1P78426 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NKX6-1P78426 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NKX6-1P78426 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NKX6-1P78426 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NKX6-1P78426 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms