Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNTNAP1P78357 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNTNAP1P78357 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNTNAP1P78357 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.04
CNTNAP1P78357 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.58■■□□□ 1.04
CNTNAP1P78357 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.58■■□□□ 1.04
CNTNAP1P78357 AC008687.5-201ENST00000593746 558 ntBASIC21.58■■□□□ 1.04
CNTNAP1P78357 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.58■■□□□ 1.04
CNTNAP1P78357 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.58■■□□□ 1.04
CNTNAP1P78357 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.58■■□□□ 1.04
CNTNAP1P78357 AC064836.3-201ENST00000607928 673 ntBASIC21.58■■□□□ 1.04
CNTNAP1P78357 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNTNAP1P78357 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.58■■□□□ 1.04
CNTNAP1P78357 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNTNAP1P78357 INTS4P1-201ENST00000438455 1935 ntBASIC21.58■■□□□ 1.04
CNTNAP1P78357 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.58■■□□□ 1.04
CNTNAP1P78357 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.57■■□□□ 1.04
CNTNAP1P78357 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP1P78357 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP1P78357 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP1P78357 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP1P78357 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.57■■□□□ 1.04
CNTNAP1P78357 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP1P78357 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP1P78357 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP1P78357 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP1P78357 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.57■■□□□ 1.04
CNTNAP1P78357 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP1P78357 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.57■■□□□ 1.04
CNTNAP1P78357 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.57■■□□□ 1.04
CNTNAP1P78357 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.57■■□□□ 1.04
CNTNAP1P78357 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.57■■□□□ 1.04
CNTNAP1P78357 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.57■■□□□ 1.04
CNTNAP1P78357 AC009154.2-201ENST00000621177 724 ntBASIC21.57■■□□□ 1.04
CNTNAP1P78357 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.57■■□□□ 1.04
CNTNAP1P78357 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP1P78357 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP1P78357 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.57■■□□□ 1.04
CNTNAP1P78357 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNTNAP1P78357 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP1P78357 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP1P78357 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP1P78357 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
CNTNAP1P78357 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CNTNAP1P78357 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP1P78357 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP1P78357 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.56■■□□□ 1.04
CNTNAP1P78357 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.56■■□□□ 1.04
CNTNAP1P78357 MTCL1P1-201ENST00000446207 792 ntBASIC21.56■■□□□ 1.04
CNTNAP1P78357 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.56■■□□□ 1.04
CNTNAP1P78357 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.56■■□□□ 1.04
CNTNAP1P78357 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.56■■□□□ 1.04
CNTNAP1P78357 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.56■■□□□ 1.04
CNTNAP1P78357 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.56■■□□□ 1.04
CNTNAP1P78357 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.56■■□□□ 1.04
CNTNAP1P78357 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.56■■□□□ 1.04
CNTNAP1P78357 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.56■■□□□ 1.04
CNTNAP1P78357 LINC01126-201ENST00000623515 1646 ntBASIC21.56■■□□□ 1.04
CNTNAP1P78357 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP1P78357 AL356309.3-201ENST00000624132 1934 ntBASIC21.56■■□□□ 1.04
CNTNAP1P78357 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP1P78357 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
CNTNAP1P78357 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
CNTNAP1P78357 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CNTNAP1P78357 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP1P78357 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP1P78357 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP1P78357 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP1P78357 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP1P78357 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP1P78357 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP1P78357 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.55■■□□□ 1.04
CNTNAP1P78357 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CNTNAP1P78357 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.55■■□□□ 1.04
CNTNAP1P78357 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.55■■□□□ 1.04
CNTNAP1P78357 AC138761.1-201ENST00000584393 385 ntBASIC21.55■■□□□ 1.04
CNTNAP1P78357 AL035252.4-201ENST00000624174 288 ntBASIC21.55■■□□□ 1.04
CNTNAP1P78357 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CNTNAP1P78357 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CNTNAP1P78357 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP1P78357 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP1P78357 AC125634.1-201ENST00000438758 1403 ntBASIC21.55■■□□□ 1.04
CNTNAP1P78357 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP1P78357 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP1P78357 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP1P78357 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNTNAP1P78357 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CNTNAP1P78357 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP1P78357 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP1P78357 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.54■■□□□ 1.04
CNTNAP1P78357 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP1P78357 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.54■■□□□ 1.04
CNTNAP1P78357 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP1P78357 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP1P78357 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.54■■□□□ 1.04
CNTNAP1P78357 AC011467.2-201ENST00000598425 242 ntBASIC21.54■■□□□ 1.04
CNTNAP1P78357 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.54■■□□□ 1.04
CNTNAP1P78357 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP1P78357 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP1P78357 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms