Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP54P61011 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.92■□□□□ 0.46
SRP54P61011 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRP54P61011 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP54P61011 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.92■□□□□ 0.46
SRP54P61011 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP54P61011 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP54P61011 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRP54P61011 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SRP54P61011 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP54P61011 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.92■□□□□ 0.46
SRP54P61011 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP54P61011 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP54P61011 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP54P61011 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRP54P61011 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP54P61011 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.92■□□□□ 0.46
SRP54P61011 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.92■□□□□ 0.46
SRP54P61011 TSPY19P-201ENST00000418461 509 ntBASIC17.92■□□□□ 0.46
SRP54P61011 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.92■□□□□ 0.46
SRP54P61011 TSPY18P-201ENST00000441642 509 ntBASIC17.92■□□□□ 0.46
SRP54P61011 KRT17P6-201ENST00000453795 1220 ntBASIC17.92■□□□□ 0.46
SRP54P61011 UNC93B7-201ENST00000509439 705 ntBASIC17.92■□□□□ 0.46
SRP54P61011 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.92■□□□□ 0.46
SRP54P61011 AC011840.4-201ENST00000578471 627 ntBASIC17.92■□□□□ 0.46
SRP54P61011 RN7SL510P-201ENST00000581311 263 ntBASIC17.92■□□□□ 0.46
SRP54P61011 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.92■□□□□ 0.46
SRP54P61011 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.92■□□□□ 0.46
SRP54P61011 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.92■□□□□ 0.46
SRP54P61011 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.92■□□□□ 0.46
SRP54P61011 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.92■□□□□ 0.46
SRP54P61011 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SRP54P61011 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.92■□□□□ 0.46
SRP54P61011 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
SRP54P61011 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.92■□□□□ 0.46
SRP54P61011 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRP54P61011 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP54P61011 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRP54P61011 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRP54P61011 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP54P61011 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP54P61011 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP54P61011 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.91■□□□□ 0.46
SRP54P61011 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP54P61011 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP54P61011 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.91■□□□□ 0.46
SRP54P61011 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.91■□□□□ 0.46
SRP54P61011 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SRP54P61011 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP54P61011 AC026396.1-201ENST00000419388 421 ntBASIC17.91■□□□□ 0.46
SRP54P61011 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
SRP54P61011 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRP54P61011 AC091304.2-201ENST00000564639 760 ntBASIC17.91■□□□□ 0.46
SRP54P61011 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.91■□□□□ 0.46
SRP54P61011 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRP54P61011 AL732292.2-201ENST00000609649 430 ntBASIC17.91■□□□□ 0.46
SRP54P61011 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP54P61011 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SRP54P61011 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.91■□□□□ 0.46
SRP54P61011 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.91■□□□□ 0.46
SRP54P61011 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP54P61011 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRP54P61011 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SRP54P61011 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRP54P61011 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP54P61011 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP54P61011 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.9■□□□□ 0.46
SRP54P61011 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP54P61011 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP54P61011 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
SRP54P61011 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SRP54P61011 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRP54P61011 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
SRP54P61011 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP54P61011 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP54P61011 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP54P61011 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.9■□□□□ 0.46
SRP54P61011 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.9■□□□□ 0.46
SRP54P61011 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.9■□□□□ 0.46
SRP54P61011 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.9■□□□□ 0.46
SRP54P61011 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.9■□□□□ 0.46
SRP54P61011 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRP54P61011 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SRP54P61011 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRP54P61011 AC099336.1-202ENST00000602961 463 ntBASIC17.9■□□□□ 0.46
SRP54P61011 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.9■□□□□ 0.46
SRP54P61011 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
SRP54P61011 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRP54P61011 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRP54P61011 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP54P61011 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRP54P61011 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
SRP54P61011 AC018445.3-201ENST00000624177 1945 ntBASIC17.9■□□□□ 0.46
SRP54P61011 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP54P61011 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SRP54P61011 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.89■□□□□ 0.45
SRP54P61011 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.89■□□□□ 0.45
SRP54P61011 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRP54P61011 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SRP54P61011 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms