Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLDN8P56748 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.31■□□□□ 0.36
CLDN8P56748 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CLDN8P56748 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN8P56748 MIR1238-201ENST00000408483 83 ntBASIC17.31■□□□□ 0.36
CLDN8P56748 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN8P56748 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN8P56748 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN8P56748 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN8P56748 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN8P56748 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 AC010240.3-201ENST00000607688 395 ntBASIC17.31■□□□□ 0.36
CLDN8P56748 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN8P56748 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLDN8P56748 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLDN8P56748 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLDN8P56748 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN8P56748 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLDN8P56748 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CLDN8P56748 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN8P56748 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLDN8P56748 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN8P56748 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN8P56748 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN8P56748 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN8P56748 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CLDN8P56748 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN8P56748 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN8P56748 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN8P56748 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN8P56748 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN8P56748 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN8P56748 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN8P56748 TSPY14P-201ENST00000303979 915 ntBASIC17.3■□□□□ 0.36
CLDN8P56748 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN8P56748 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN8P56748 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN8P56748 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN8P56748 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN8P56748 DUTP2-201ENST00000519164 463 ntBASIC17.3■□□□□ 0.36
CLDN8P56748 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CLDN8P56748 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLDN8P56748 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN8P56748 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN8P56748 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN8P56748 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLDN8P56748 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN8P56748 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN8P56748 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN8P56748 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN8P56748 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLDN8P56748 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN8P56748 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN8P56748 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN8P56748 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLDN8P56748 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN8P56748 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN8P56748 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN8P56748 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN8P56748 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLDN8P56748 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN8P56748 EGLN1P1-201ENST00000531623 762 ntBASIC17.29■□□□□ 0.36
CLDN8P56748 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN8P56748 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN8P56748 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN8P56748 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLDN8P56748 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN8P56748 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN8P56748 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN8P56748 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN8P56748 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN8P56748 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN8P56748 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN8P56748 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN8P56748 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN8P56748 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLDN8P56748 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN8P56748 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN8P56748 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLDN8P56748 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN8P56748 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN8P56748 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN8P56748 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN8P56748 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN8P56748 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN8P56748 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms