Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.39■□□□□ 0.53
WNT3AP56704 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.39■□□□□ 0.53
WNT3AP56704 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.39■□□□□ 0.53
WNT3AP56704 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
WNT3AP56704 FLJ13224-201ENST00000313737 1514 ntBASIC18.39■□□□□ 0.53
WNT3AP56704 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.38■□□□□ 0.53
WNT3AP56704 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 BCL2-203ENST00000589955 5011 ntBASIC18.38■□□□□ 0.53
WNT3AP56704 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.38■□□□□ 0.53
WNT3AP56704 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
WNT3AP56704 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.38■□□□□ 0.53
WNT3AP56704 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
WNT3AP56704 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 HLA-F-220ENST00000434407 884 ntBASIC18.38■□□□□ 0.53
WNT3AP56704 AL359075.1-203ENST00000462729 1002 ntBASIC18.38■□□□□ 0.53
WNT3AP56704 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
WNT3AP56704 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.38■□□□□ 0.53
WNT3AP56704 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.38■□□□□ 0.53
WNT3AP56704 AC008687.5-201ENST00000593746 558 ntBASIC18.38■□□□□ 0.53
WNT3AP56704 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.38■□□□□ 0.53
WNT3AP56704 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
WNT3AP56704 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
WNT3AP56704 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
WNT3AP56704 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
WNT3AP56704 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.37■□□□□ 0.53
WNT3AP56704 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.37■□□□□ 0.53
WNT3AP56704 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
WNT3AP56704 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
WNT3AP56704 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 AC092647.4-201ENST00000457211 535 ntBASIC18.37■□□□□ 0.53
WNT3AP56704 AC063952.2-201ENST00000498792 1227 ntBASIC18.37■□□□□ 0.53
WNT3AP56704 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.37■□□□□ 0.53
WNT3AP56704 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.37■□□□□ 0.53
WNT3AP56704 AC024563.2-201ENST00000603282 481 ntBASIC18.37■□□□□ 0.53
WNT3AP56704 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.37■□□□□ 0.53
WNT3AP56704 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.37■□□□□ 0.53
WNT3AP56704 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.37■□□□□ 0.53
WNT3AP56704 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.37■□□□□ 0.53
WNT3AP56704 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.37■□□□□ 0.53
WNT3AP56704 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
WNT3AP56704 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.37■□□□□ 0.53
WNT3AP56704 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.37■□□□□ 0.53
WNT3AP56704 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
WNT3AP56704 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.37■□□□□ 0.53
WNT3AP56704 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
WNT3AP56704 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
WNT3AP56704 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.36■□□□□ 0.53
WNT3AP56704 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
WNT3AP56704 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.36■□□□□ 0.53
WNT3AP56704 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms