Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PEX3P56589 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX3P56589 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PEX3P56589 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PEX3P56589 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PEX3P56589 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.02■□□□□ 0.79
PEX3P56589 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.02■□□□□ 0.79
PEX3P56589 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PEX3P56589 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.02■□□□□ 0.79
PEX3P56589 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PEX3P56589 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PEX3P56589 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.01■□□□□ 0.79
PEX3P56589 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PEX3P56589 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.01■□□□□ 0.79
PEX3P56589 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PEX3P56589 AL096828.2-201ENST00000567259 1965 ntBASIC20.01■□□□□ 0.79
PEX3P56589 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PEX3P56589 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PEX3P56589 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PEX3P56589 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.01■□□□□ 0.79
PEX3P56589 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PEX3P56589 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.01■□□□□ 0.79
PEX3P56589 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.01■□□□□ 0.79
PEX3P56589 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PEX3P56589 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PEX3P56589 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.01■□□□□ 0.79
PEX3P56589 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.01■□□□□ 0.79
PEX3P56589 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.01■□□□□ 0.79
PEX3P56589 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PEX3P56589 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.01■□□□□ 0.79
PEX3P56589 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PEX3P56589 LINC00167-201ENST00000530583 1419 ntBASIC20.01■□□□□ 0.79
PEX3P56589 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.01■□□□□ 0.79
PEX3P56589 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.01■□□□□ 0.79
PEX3P56589 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.01■□□□□ 0.79
PEX3P56589 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PEX3P56589 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.01■□□□□ 0.79
PEX3P56589 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PEX3P56589 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PEX3P56589 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PEX3P56589 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PEX3P56589 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PEX3P56589 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
PEX3P56589 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PEX3P56589 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20■□□□□ 0.79
PEX3P56589 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PEX3P56589 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20■□□□□ 0.79
PEX3P56589 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PEX3P56589 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20■□□□□ 0.79
PEX3P56589 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20■□□□□ 0.79
PEX3P56589 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PEX3P56589 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20■□□□□ 0.79
PEX3P56589 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
PEX3P56589 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20■□□□□ 0.79
PEX3P56589 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20■□□□□ 0.79
PEX3P56589 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20■□□□□ 0.79
PEX3P56589 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PEX3P56589 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20■□□□□ 0.79
PEX3P56589 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20■□□□□ 0.79
PEX3P56589 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PEX3P56589 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PEX3P56589 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20■□□□□ 0.79
PEX3P56589 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PEX3P56589 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20■□□□□ 0.79
PEX3P56589 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PEX3P56589 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20■□□□□ 0.79
PEX3P56589 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PEX3P56589 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
PEX3P56589 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.99■□□□□ 0.79
PEX3P56589 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.99■□□□□ 0.79
PEX3P56589 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.99■□□□□ 0.79
PEX3P56589 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.99■□□□□ 0.79
PEX3P56589 AC093010.1-201ENST00000473625 1624 ntBASIC19.99■□□□□ 0.79
PEX3P56589 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.99■□□□□ 0.79
PEX3P56589 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PEX3P56589 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.99■□□□□ 0.79
PEX3P56589 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PEX3P56589 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PEX3P56589 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.99■□□□□ 0.79
PEX3P56589 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PEX3P56589 TSSC2-201ENST00000450217 709 ntBASIC19.99■□□□□ 0.79
PEX3P56589 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.99■□□□□ 0.79
PEX3P56589 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.99■□□□□ 0.79
PEX3P56589 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PEX3P56589 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PEX3P56589 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.99■□□□□ 0.79
PEX3P56589 AC132938.6-201ENST00000623828 1655 ntBASIC19.99■□□□□ 0.79
PEX3P56589 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PEX3P56589 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.99■□□□□ 0.79
PEX3P56589 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.99■□□□□ 0.79
PEX3P56589 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.99■□□□□ 0.79
PEX3P56589 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PEX3P56589 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms