Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH11P55287 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH11P55287 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH11P55287 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH11P55287 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH11P55287 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
CDH11P55287 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH11P55287 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH11P55287 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH11P55287 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH11P55287 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH11P55287 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH11P55287 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH11P55287 AC005521.1-201ENST00000393351 872 ntBASIC16.69■□□□□ 0.26
CDH11P55287 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDH11P55287 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH11P55287 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH11P55287 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH11P55287 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH11P55287 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.69■□□□□ 0.26
CDH11P55287 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
CDH11P55287 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH11P55287 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDH11P55287 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH11P55287 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH11P55287 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH11P55287 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDH11P55287 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH11P55287 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH11P55287 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH11P55287 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
CDH11P55287 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH11P55287 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDH11P55287 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CDH11P55287 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 AL137013.1-201ENST00000432946 1228 ntBASIC16.68■□□□□ 0.26
CDH11P55287 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.68■□□□□ 0.26
CDH11P55287 KRT18P57-201ENST00000443599 1254 ntBASIC16.68■□□□□ 0.26
CDH11P55287 SLC25A3P1-201ENST00000443844 931 ntBASIC16.68■□□□□ 0.26
CDH11P55287 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.68■□□□□ 0.26
CDH11P55287 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDH11P55287 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH11P55287 AP000692.2-201ENST00000608391 879 ntBASIC16.68■□□□□ 0.26
CDH11P55287 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH11P55287 AC092865.7-201ENST00000641832 219 ntBASIC16.68■□□□□ 0.26
CDH11P55287 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CDH11P55287 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH11P55287 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH11P55287 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH11P55287 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH11P55287 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CDH11P55287 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CDH11P55287 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CDH11P55287 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH11P55287 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CDH11P55287 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH11P55287 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDH11P55287 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH11P55287 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH11P55287 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
CDH11P55287 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 MFAP1P1-201ENST00000442257 1255 ntBASIC16.67■□□□□ 0.26
CDH11P55287 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH11P55287 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH11P55287 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 248.6 ms