Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC025062.2-201ENST00000605477 670 ntBASIC20.94■□□□□ 0.94
HMGCS2P54868 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.94■□□□□ 0.94
HMGCS2P54868 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGCS2P54868 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMGCS2P54868 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HMGCS2P54868 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGCS2P54868 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGCS2P54868 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
HMGCS2P54868 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS2P54868 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.93■□□□□ 0.94
HMGCS2P54868 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS2P54868 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.93■□□□□ 0.94
HMGCS2P54868 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HMGCS2P54868 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS2P54868 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS2P54868 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS2P54868 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS2P54868 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.93■□□□□ 0.94
HMGCS2P54868 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.93■□□□□ 0.94
HMGCS2P54868 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS2P54868 AC092910.1-201ENST00000482027 1129 ntBASIC20.93■□□□□ 0.94
HMGCS2P54868 OR7E14P-202ENST00000530490 1290 ntBASIC20.93■□□□□ 0.94
HMGCS2P54868 AC145285.3-201ENST00000564603 959 ntBASIC20.93■□□□□ 0.94
HMGCS2P54868 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.93■□□□□ 0.94
HMGCS2P54868 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS2P54868 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS2P54868 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.93■□□□□ 0.94
HMGCS2P54868 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS2P54868 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS2P54868 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS2P54868 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS2P54868 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS2P54868 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS2P54868 HLA-J-201ENST00000462773 1622 ntBASIC20.93■□□□□ 0.94
HMGCS2P54868 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS2P54868 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS2P54868 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS2P54868 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS2P54868 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.92■□□□□ 0.94
HMGCS2P54868 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.92■□□□□ 0.94
HMGCS2P54868 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS2P54868 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.92■□□□□ 0.94
HMGCS2P54868 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS2P54868 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS2P54868 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS2P54868 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.92■□□□□ 0.94
HMGCS2P54868 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.92■□□□□ 0.94
HMGCS2P54868 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
HMGCS2P54868 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS2P54868 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS2P54868 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS2P54868 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.92■□□□□ 0.94
HMGCS2P54868 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
HMGCS2P54868 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.92■□□□□ 0.94
HMGCS2P54868 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.92■□□□□ 0.94
HMGCS2P54868 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS2P54868 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS2P54868 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS2P54868 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS2P54868 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS2P54868 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS2P54868 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS2P54868 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS2P54868 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.91■□□□□ 0.94
HMGCS2P54868 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.91■□□□□ 0.94
HMGCS2P54868 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
HMGCS2P54868 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS2P54868 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS2P54868 AC098831.1-202ENST00000438821 336 ntBASIC20.91■□□□□ 0.94
HMGCS2P54868 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS2P54868 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.91■□□□□ 0.94
HMGCS2P54868 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.91■□□□□ 0.94
HMGCS2P54868 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS2P54868 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.91■□□□□ 0.94
HMGCS2P54868 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS2P54868 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.91■□□□□ 0.94
HMGCS2P54868 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.91■□□□□ 0.94
HMGCS2P54868 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGCS2P54868 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCS2P54868 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCS2P54868 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCS2P54868 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCS2P54868 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCS2P54868 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCS2P54868 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCS2P54868 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
HMGCS2P54868 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HMGCS2P54868 PGAM5P1-201ENST00000518923 814 ntBASIC20.9■□□□□ 0.94
HMGCS2P54868 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCS2P54868 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGCS2P54868 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCS2P54868 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGCS2P54868 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGCS2P54868 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HMGCS2P54868 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCS2P54868 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCS2P54868 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.89■□□□□ 0.93
HMGCS2P54868 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.89■□□□□ 0.93
HMGCS2P54868 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.89■□□□□ 0.93
HMGCS2P54868 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms