Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAD23BP54727 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAD23BP54727 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.43■□□□□ 0.7
RAD23BP54727 MIR662-201ENST00000384847 95 ntBASIC19.43■□□□□ 0.7
RAD23BP54727 KRT18P35-201ENST00000510488 1269 ntBASIC19.43■□□□□ 0.7
RAD23BP54727 ZNF444P1-201ENST00000559497 298 ntBASIC19.43■□□□□ 0.7
RAD23BP54727 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.43■□□□□ 0.7
RAD23BP54727 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.43■□□□□ 0.7
RAD23BP54727 AC024563.2-201ENST00000603282 481 ntBASIC19.43■□□□□ 0.7
RAD23BP54727 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAD23BP54727 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RAD23BP54727 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.43■□□□□ 0.7
RAD23BP54727 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAD23BP54727 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.43■□□□□ 0.7
RAD23BP54727 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAD23BP54727 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAD23BP54727 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAD23BP54727 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAD23BP54727 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAD23BP54727 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RAD23BP54727 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RAD23BP54727 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAD23BP54727 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAD23BP54727 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAD23BP54727 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAD23BP54727 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.42■□□□□ 0.7
RAD23BP54727 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAD23BP54727 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.42■□□□□ 0.7
RAD23BP54727 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.42■□□□□ 0.7
RAD23BP54727 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAD23BP54727 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAD23BP54727 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.42■□□□□ 0.7
RAD23BP54727 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAD23BP54727 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.42■□□□□ 0.7
RAD23BP54727 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.42■□□□□ 0.7
RAD23BP54727 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.42■□□□□ 0.7
RAD23BP54727 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.42■□□□□ 0.7
RAD23BP54727 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAD23BP54727 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAD23BP54727 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAD23BP54727 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAD23BP54727 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAD23BP54727 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAD23BP54727 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.42■□□□□ 0.7
RAD23BP54727 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RAD23BP54727 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAD23BP54727 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.41■□□□□ 0.7
RAD23BP54727 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAD23BP54727 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.41■□□□□ 0.7
RAD23BP54727 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.41■□□□□ 0.7
RAD23BP54727 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.41■□□□□ 0.7
RAD23BP54727 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.41■□□□□ 0.7
RAD23BP54727 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.41■□□□□ 0.7
RAD23BP54727 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.41■□□□□ 0.7
RAD23BP54727 AL445228.2-201ENST00000605589 952 ntBASIC19.41■□□□□ 0.7
RAD23BP54727 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.41■□□□□ 0.7
RAD23BP54727 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.41■□□□□ 0.7
RAD23BP54727 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAD23BP54727 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAD23BP54727 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RAD23BP54727 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.4■□□□□ 0.7
RAD23BP54727 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAD23BP54727 AC018470.1-201ENST00000624790 3129 ntBASIC19.4■□□□□ 0.7
RAD23BP54727 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAD23BP54727 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAD23BP54727 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAD23BP54727 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAD23BP54727 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.4■□□□□ 0.7
RAD23BP54727 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.4■□□□□ 0.7
RAD23BP54727 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.4■□□□□ 0.7
RAD23BP54727 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RAD23BP54727 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAD23BP54727 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAD23BP54727 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAD23BP54727 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAD23BP54727 KRT89P-201ENST00000620027 1478 ntBASIC19.4■□□□□ 0.7
RAD23BP54727 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAD23BP54727 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAD23BP54727 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAD23BP54727 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAD23BP54727 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.4■□□□□ 0.7
RAD23BP54727 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
RAD23BP54727 AL354751.1-201ENST00000412768 1863 ntBASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms