Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ATP1B3P54709 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ATP1B3P54709 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.8■□□□□ 0.12
ATP1B3P54709 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP1B3P54709 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.8■□□□□ 0.12
ATP1B3P54709 AP005242.2-201ENST00000580065 1175 ntBASIC15.8■□□□□ 0.12
ATP1B3P54709 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.8■□□□□ 0.12
ATP1B3P54709 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP1B3P54709 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP1B3P54709 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP1B3P54709 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP1B3P54709 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ATP1B3P54709 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP1B3P54709 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP1B3P54709 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP1B3P54709 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.79■□□□□ 0.12
ATP1B3P54709 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 GMCL1P1-201ENST00000463439 1581 ntBASIC15.79■□□□□ 0.12
ATP1B3P54709 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ATP1B3P54709 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ATP1B3P54709 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.79■□□□□ 0.12
ATP1B3P54709 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.79■□□□□ 0.12
ATP1B3P54709 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.79■□□□□ 0.12
ATP1B3P54709 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.79■□□□□ 0.12
ATP1B3P54709 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.79■□□□□ 0.12
ATP1B3P54709 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.79■□□□□ 0.12
ATP1B3P54709 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.79■□□□□ 0.12
ATP1B3P54709 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.79■□□□□ 0.12
ATP1B3P54709 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.79■□□□□ 0.12
ATP1B3P54709 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ATP1B3P54709 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ATP1B3P54709 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATP1B3P54709 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP1B3P54709 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.78■□□□□ 0.12
ATP1B3P54709 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ATP1B3P54709 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATP1B3P54709 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP1B3P54709 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.78■□□□□ 0.12
ATP1B3P54709 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
ATP1B3P54709 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
ATP1B3P54709 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATP1B3P54709 PCDHA12-202ENST00000613593 2588 ntBASIC15.78■□□□□ 0.12
ATP1B3P54709 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ATP1B3P54709 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP1B3P54709 UNC93B2-201ENST00000285383 730 ntBASIC15.78■□□□□ 0.12
ATP1B3P54709 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP1B3P54709 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.78■□□□□ 0.12
ATP1B3P54709 MIR718-201ENST00000390190 70 ntBASIC15.78■□□□□ 0.12
ATP1B3P54709 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
ATP1B3P54709 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.78■□□□□ 0.12
ATP1B3P54709 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP1B3P54709 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ATP1B3P54709 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP1B3P54709 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ATP1B3P54709 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ATP1B3P54709 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP1B3P54709 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP1B3P54709 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP1B3P54709 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP1B3P54709 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP1B3P54709 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ATP1B3P54709 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATP1B3P54709 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ATP1B3P54709 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.77■□□□□ 0.12
ATP1B3P54709 KRT8P50-201ENST00000562022 1438 ntBASIC15.77■□□□□ 0.12
ATP1B3P54709 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATP1B3P54709 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATP1B3P54709 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms