Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGA2P52926 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HMGA2P52926 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.6■□□□□ 0.25
HMGA2P52926 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGA2P52926 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGA2P52926 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.6■□□□□ 0.25
HMGA2P52926 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGA2P52926 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.6■□□□□ 0.25
HMGA2P52926 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGA2P52926 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HMGA2P52926 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HMGA2P52926 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.6■□□□□ 0.25
HMGA2P52926 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.6■□□□□ 0.25
HMGA2P52926 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.6■□□□□ 0.25
HMGA2P52926 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.6■□□□□ 0.25
HMGA2P52926 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.6■□□□□ 0.25
HMGA2P52926 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.6■□□□□ 0.25
HMGA2P52926 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.6■□□□□ 0.25
HMGA2P52926 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGA2P52926 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
HMGA2P52926 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGA2P52926 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
HMGA2P52926 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HMGA2P52926 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.6■□□□□ 0.25
HMGA2P52926 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.6■□□□□ 0.25
HMGA2P52926 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HMGA2P52926 AC099398.1-201ENST00000567919 2776 ntBASIC16.6■□□□□ 0.25
HMGA2P52926 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.6■□□□□ 0.25
HMGA2P52926 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.59■□□□□ 0.25
HMGA2P52926 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HMGA2P52926 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMGA2P52926 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGA2P52926 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGA2P52926 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.59■□□□□ 0.25
HMGA2P52926 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.59■□□□□ 0.25
HMGA2P52926 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMGA2P52926 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGA2P52926 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMGA2P52926 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGA2P52926 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGA2P52926 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGA2P52926 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGA2P52926 AL359736.2-201ENST00000621992 437 ntBASIC16.59■□□□□ 0.25
HMGA2P52926 CR769767.2-201ENST00000622735 460 ntBASIC16.59■□□□□ 0.25
HMGA2P52926 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMGA2P52926 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMGA2P52926 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HMGA2P52926 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
HMGA2P52926 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGA2P52926 AC132938.6-201ENST00000623828 1655 ntBASIC16.59■□□□□ 0.25
HMGA2P52926 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
HMGA2P52926 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMGA2P52926 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.58■□□□□ 0.25
HMGA2P52926 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
HMGA2P52926 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGA2P52926 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGA2P52926 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.58■□□□□ 0.24
HMGA2P52926 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HMGA2P52926 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.58■□□□□ 0.24
HMGA2P52926 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.58■□□□□ 0.24
HMGA2P52926 AL353719.1-201ENST00000566847 864 ntBASIC16.58■□□□□ 0.24
HMGA2P52926 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.58■□□□□ 0.24
HMGA2P52926 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
HMGA2P52926 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.58■□□□□ 0.24
HMGA2P52926 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGA2P52926 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.58■□□□□ 0.24
HMGA2P52926 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HMGA2P52926 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.58■□□□□ 0.24
HMGA2P52926 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HMGA2P52926 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.58■□□□□ 0.24
HMGA2P52926 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.58■□□□□ 0.24
HMGA2P52926 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGA2P52926 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGA2P52926 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGA2P52926 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGA2P52926 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGA2P52926 AC022211.2-201ENST00000585075 2527 ntBASIC16.57■□□□□ 0.24
HMGA2P52926 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGA2P52926 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGA2P52926 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGA2P52926 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGA2P52926 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HMGA2P52926 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HMGA2P52926 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGA2P52926 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGA2P52926 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGA2P52926 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HMGA2P52926 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HMGA2P52926 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 AL121761.2-201ENST00000598007 1648 ntBASIC16.57■□□□□ 0.24
HMGA2P52926 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGA2P52926 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms