Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
HCFC1P51610 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HCFC1P51610 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.8■□□□□ 0.12
HCFC1P51610 AC005104.2-201ENST00000427818 678 ntBASIC15.8■□□□□ 0.12
HCFC1P51610 RPS2P1-201ENST00000434010 821 ntBASIC15.8■□□□□ 0.12
HCFC1P51610 AC132008.2-207ENST00000454517 770 ntBASIC15.8■□□□□ 0.12
HCFC1P51610 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.8■□□□□ 0.12
HCFC1P51610 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.8■□□□□ 0.12
HCFC1P51610 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.8■□□□□ 0.12
HCFC1P51610 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HCFC1P51610 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HCFC1P51610 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HCFC1P51610 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.8■□□□□ 0.12
HCFC1P51610 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.8■□□□□ 0.12
HCFC1P51610 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.8■□□□□ 0.12
HCFC1P51610 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.8■□□□□ 0.12
HCFC1P51610 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.8■□□□□ 0.12
HCFC1P51610 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.8■□□□□ 0.12
HCFC1P51610 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HCFC1P51610 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.8■□□□□ 0.12
HCFC1P51610 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.8■□□□□ 0.12
HCFC1P51610 AC098831.1-202ENST00000438821 336 ntBASIC15.8■□□□□ 0.12
HCFC1P51610 RNA5SP415-201ENST00000517246 115 ntBASIC15.8■□□□□ 0.12
HCFC1P51610 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
HCFC1P51610 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.8■□□□□ 0.12
HCFC1P51610 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 AC027601.4-201ENST00000611259 610 ntBASIC15.8■□□□□ 0.12
HCFC1P51610 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.8■□□□□ 0.12
HCFC1P51610 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HCFC1P51610 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC1P51610 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC1P51610 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
HCFC1P51610 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.79■□□□□ 0.12
HCFC1P51610 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC1P51610 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC1P51610 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.79■□□□□ 0.12
HCFC1P51610 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC1P51610 YBX2P1-201ENST00000394192 760 ntBASIC15.79■□□□□ 0.12
HCFC1P51610 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.79■□□□□ 0.12
HCFC1P51610 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.79■□□□□ 0.12
HCFC1P51610 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.79■□□□□ 0.12
HCFC1P51610 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC1P51610 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.79■□□□□ 0.12
HCFC1P51610 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.79■□□□□ 0.12
HCFC1P51610 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.79■□□□□ 0.12
HCFC1P51610 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.79■□□□□ 0.12
HCFC1P51610 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC1P51610 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC1P51610 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
HCFC1P51610 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC1P51610 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HCFC1P51610 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC1P51610 ZNF259P1-201ENST00000407656 1365 ntBASIC15.79■□□□□ 0.12
HCFC1P51610 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC1P51610 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HCFC1P51610 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC1P51610 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HCFC1P51610 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HCFC1P51610 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 UPF3AP3-201ENST00000420996 769 ntBASIC15.78■□□□□ 0.12
HCFC1P51610 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.78■□□□□ 0.12
HCFC1P51610 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 AL139288.1-201ENST00000623748 933 ntBASIC15.78■□□□□ 0.12
HCFC1P51610 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
HCFC1P51610 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.78■□□□□ 0.12
HCFC1P51610 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HCFC1P51610 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
HCFC1P51610 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HCFC1P51610 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
HCFC1P51610 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HCFC1P51610 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms