Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB28P51157 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB28P51157 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB28P51157 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB28P51157 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB28P51157 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB28P51157 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.54■□□□□ 0.4
RAB28P51157 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB28P51157 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB28P51157 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB28P51157 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB28P51157 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB28P51157 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB28P51157 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB28P51157 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB28P51157 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RAB28P51157 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.54■□□□□ 0.4
RAB28P51157 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB28P51157 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB28P51157 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB28P51157 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.54■□□□□ 0.4
RAB28P51157 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB28P51157 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB28P51157 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RAB28P51157 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB28P51157 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
RAB28P51157 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB28P51157 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB28P51157 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB28P51157 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB28P51157 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.53■□□□□ 0.4
RAB28P51157 TSPY12P-201ENST00000421279 868 ntBASIC17.53■□□□□ 0.4
RAB28P51157 CHCHD2P8-201ENST00000429873 447 ntBASIC17.53■□□□□ 0.4
RAB28P51157 TSSC2-201ENST00000450217 709 ntBASIC17.53■□□□□ 0.4
RAB28P51157 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB28P51157 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.53■□□□□ 0.4
RAB28P51157 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB28P51157 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RAB28P51157 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.53■□□□□ 0.4
RAB28P51157 AC090616.6-201ENST00000582640 721 ntBASIC17.53■□□□□ 0.4
RAB28P51157 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB28P51157 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RAB28P51157 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB28P51157 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 AC016734.2-201ENST00000624325 1377 ntBASIC17.53■□□□□ 0.4
RAB28P51157 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB28P51157 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB28P51157 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RAB28P51157 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB28P51157 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RAB28P51157 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB28P51157 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB28P51157 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB28P51157 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB28P51157 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB28P51157 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RAB28P51157 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB28P51157 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
RAB28P51157 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB28P51157 BICD1-207ENST00000551848 1962 ntBASIC17.52■□□□□ 0.4
RAB28P51157 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB28P51157 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB28P51157 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB28P51157 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB28P51157 KRT18P65-201ENST00000439811 1286 ntBASIC17.52■□□□□ 0.4
RAB28P51157 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB28P51157 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB28P51157 GUSBP12-201ENST00000513727 720 ntBASIC17.52■□□□□ 0.4
RAB28P51157 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB28P51157 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RAB28P51157 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAB28P51157 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAB28P51157 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
RAB28P51157 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAB28P51157 AC132938.6-201ENST00000623828 1655 ntBASIC17.52■□□□□ 0.39
RAB28P51157 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB28P51157 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RAB28P51157 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB28P51157 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB28P51157 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms