Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
PCP4P48539 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.5□□□□□ -0.41
PCP4P48539 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
PCP4P48539 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCP4P48539 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.5□□□□□ -0.41
PCP4P48539 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
PCP4P48539 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.49□□□□□ -0.41
PCP4P48539 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
PCP4P48539 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
PCP4P48539 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.49□□□□□ -0.41
PCP4P48539 AL513523.2-202ENST00000427283 2040 ntBASIC12.49□□□□□ -0.41
PCP4P48539 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC12.49□□□□□ -0.41
PCP4P48539 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.49□□□□□ -0.41
PCP4P48539 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
PCP4P48539 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.49□□□□□ -0.41
PCP4P48539 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
PCP4P48539 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
PCP4P48539 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
PCP4P48539 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.49□□□□□ -0.41
PCP4P48539 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.49□□□□□ -0.41
PCP4P48539 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.49□□□□□ -0.41
PCP4P48539 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
PCP4P48539 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
PCP4P48539 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCP4P48539 AC117489.1-201ENST00000625169 3217 ntBASIC12.49□□□□□ -0.41
PCP4P48539 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
PCP4P48539 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
PCP4P48539 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 FP700111.2-201ENST00000619190 1892 ntBASIC12.48□□□□□ -0.41
PCP4P48539 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC12.48□□□□□ -0.41
PCP4P48539 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
PCP4P48539 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
PCP4P48539 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
PCP4P48539 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.48□□□□□ -0.41
PCP4P48539 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.48□□□□□ -0.41
PCP4P48539 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
PCP4P48539 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC12.48□□□□□ -0.41
PCP4P48539 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
PCP4P48539 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC12.48□□□□□ -0.41
PCP4P48539 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
PCP4P48539 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
PCP4P48539 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCP4P48539 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
PCP4P48539 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.47□□□□□ -0.41
PCP4P48539 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
PCP4P48539 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms