Protein–RNA interactions for Protein: P43234

CTSO, Cathepsin O, humanhuman

Predicted RBP Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSOP43234 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTSOP43234 AC132938.6-201ENST00000623828 1655 ntBASIC18.41■□□□□ 0.54
CTSOP43234 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
CTSOP43234 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTSOP43234 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CTSOP43234 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CTSOP43234 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CTSOP43234 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CTSOP43234 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CTSOP43234 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.4■□□□□ 0.54
CTSOP43234 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.4■□□□□ 0.54
CTSOP43234 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 VENTXP7-201ENST00000475503 772 ntBASIC18.4■□□□□ 0.54
CTSOP43234 KRT18P31-201ENST00000506277 1292 ntBASIC18.4■□□□□ 0.54
CTSOP43234 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.4■□□□□ 0.54
CTSOP43234 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.4■□□□□ 0.54
CTSOP43234 PHGDH-209ENST00000641074 1780 ntBASIC18.4■□□□□ 0.54
CTSOP43234 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSOP43234 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CTSOP43234 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
CTSOP43234 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CTSOP43234 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CTSOP43234 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSOP43234 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSOP43234 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSOP43234 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSOP43234 AC246785.2-201ENST00000432512 513 ntBASIC18.39■□□□□ 0.53
CTSOP43234 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.39■□□□□ 0.53
CTSOP43234 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CTSOP43234 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.39■□□□□ 0.53
CTSOP43234 AC091304.2-201ENST00000564639 760 ntBASIC18.39■□□□□ 0.53
CTSOP43234 AC111152.3-201ENST00000569699 673 ntBASIC18.39■□□□□ 0.53
CTSOP43234 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.39■□□□□ 0.53
CTSOP43234 AC005336.2-201ENST00000593183 939 ntBASIC18.39■□□□□ 0.53
CTSOP43234 AL121772.3-201ENST00000610840 674 ntBASIC18.39■□□□□ 0.53
CTSOP43234 AC009154.2-201ENST00000621177 724 ntBASIC18.39■□□□□ 0.53
CTSOP43234 AL691432.3-201ENST00000621860 400 ntBASIC18.39■□□□□ 0.53
CTSOP43234 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.39■□□□□ 0.53
CTSOP43234 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.39■□□□□ 0.53
CTSOP43234 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSOP43234 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSOP43234 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.39■□□□□ 0.53
CTSOP43234 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSOP43234 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.39■□□□□ 0.53
CTSOP43234 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSOP43234 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTSOP43234 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.39■□□□□ 0.53
CTSOP43234 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTSOP43234 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.39■□□□□ 0.53
CTSOP43234 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.39■□□□□ 0.53
CTSOP43234 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.38■□□□□ 0.53
CTSOP43234 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSOP43234 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CTSOP43234 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTSOP43234 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.38■□□□□ 0.53
CTSOP43234 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSOP43234 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSOP43234 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSOP43234 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTSOP43234 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTSOP43234 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.38■□□□□ 0.53
CTSOP43234 TPM4P1-201ENST00000436100 807 ntBASIC18.38■□□□□ 0.53
CTSOP43234 MTCL1P1-201ENST00000446207 792 ntBASIC18.38■□□□□ 0.53
CTSOP43234 MINOS1P3-201ENST00000457048 203 ntBASIC18.38■□□□□ 0.53
CTSOP43234 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CTSOP43234 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSOP43234 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSOP43234 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTSOP43234 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTSOP43234 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSOP43234 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSOP43234 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.38■□□□□ 0.53
CTSOP43234 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSOP43234 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSOP43234 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.38■□□□□ 0.53
CTSOP43234 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CTSOP43234 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.37■□□□□ 0.53
CTSOP43234 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CTSOP43234 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSOP43234 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSOP43234 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.37■□□□□ 0.53
CTSOP43234 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSOP43234 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CTSOP43234 NUS1P2-201ENST00000417358 873 ntBASIC18.37■□□□□ 0.53
CTSOP43234 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSOP43234 EMBP1-201ENST00000458200 901 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms