Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.87■□□□□ 0.13
GDNFP39905 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.87■□□□□ 0.13
GDNFP39905 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
GDNFP39905 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDNFP39905 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GDNFP39905 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GDNFP39905 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDNFP39905 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDNFP39905 AC011676.5-201ENST00000624864 2660 ntBASIC15.87■□□□□ 0.13
GDNFP39905 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDNFP39905 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDNFP39905 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.87■□□□□ 0.13
GDNFP39905 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDNFP39905 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.87■□□□□ 0.13
GDNFP39905 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GDNFP39905 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.86■□□□□ 0.13
GDNFP39905 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.86■□□□□ 0.13
GDNFP39905 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.86■□□□□ 0.13
GDNFP39905 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.86■□□□□ 0.13
GDNFP39905 FAM197Y4-202ENST00000622692 608 ntBASIC15.86■□□□□ 0.13
GDNFP39905 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.86■□□□□ 0.13
GDNFP39905 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.86■□□□□ 0.13
GDNFP39905 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
GDNFP39905 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
GDNFP39905 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
GDNFP39905 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.86■□□□□ 0.13
GDNFP39905 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.86■□□□□ 0.13
GDNFP39905 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GDNFP39905 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.86■□□□□ 0.13
GDNFP39905 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.86■□□□□ 0.13
GDNFP39905 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
GDNFP39905 KRT8P45-201ENST00000414328 1447 ntBASIC15.85■□□□□ 0.13
GDNFP39905 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.85■□□□□ 0.13
GDNFP39905 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.85■□□□□ 0.13
GDNFP39905 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
GDNFP39905 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
GDNFP39905 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
GDNFP39905 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.85■□□□□ 0.13
GDNFP39905 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.85■□□□□ 0.13
GDNFP39905 AC142381.4-202ENST00000563973 229 ntBASIC15.85■□□□□ 0.13
GDNFP39905 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.85■□□□□ 0.13
GDNFP39905 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.85■□□□□ 0.13
GDNFP39905 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.85■□□□□ 0.13
GDNFP39905 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.85■□□□□ 0.13
GDNFP39905 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.85■□□□□ 0.13
GDNFP39905 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
GDNFP39905 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 HTR7P1-201ENST00000538670 1336 ntBASIC15.85■□□□□ 0.13
GDNFP39905 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDNFP39905 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.85■□□□□ 0.13
GDNFP39905 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
GDNFP39905 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.84■□□□□ 0.13
GDNFP39905 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
GDNFP39905 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.84■□□□□ 0.13
GDNFP39905 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
GDNFP39905 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDNFP39905 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms